Coexpression cluster: Cluster_120 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034660 ncRNA metabolic process 12.0% (9/75) 5.86 0.0 0.0
GO:0043038 amino acid activation 9.33% (7/75) 6.54 0.0 0.0
GO:0043039 tRNA aminoacylation 9.33% (7/75) 6.54 0.0 0.0
GO:0006520 amino acid metabolic process 12.0% (9/75) 5.32 0.0 0.0
GO:0016875 ligase activity, forming carbon-oxygen bonds 9.33% (7/75) 6.57 0.0 0.0
GO:0004812 aminoacyl-tRNA ligase activity 9.33% (7/75) 6.57 0.0 0.0
GO:0016874 ligase activity 10.67% (8/75) 5.64 0.0 0.0
GO:0140101 catalytic activity, acting on a tRNA 9.33% (7/75) 6.05 0.0 0.0
GO:0006399 tRNA metabolic process 9.33% (7/75) 6.0 0.0 0.0
GO:0016070 RNA metabolic process 13.33% (10/75) 4.4 0.0 0.0
GO:0006418 tRNA aminoacylation for protein translation 8.0% (6/75) 6.53 0.0 0.0
GO:0140098 catalytic activity, acting on RNA 10.67% (8/75) 5.12 0.0 0.0
GO:0019752 carboxylic acid metabolic process 12.0% (9/75) 4.52 0.0 0.0
GO:0043436 oxoacid metabolic process 12.0% (9/75) 4.52 0.0 0.0
GO:0006082 organic acid metabolic process 12.0% (9/75) 4.5 0.0 0.0
GO:0005488 binding 40.0% (30/75) 1.78 0.0 0.0
GO:0090304 nucleic acid metabolic process 13.33% (10/75) 3.92 0.0 0.0
GO:0140640 catalytic activity, acting on a nucleic acid 10.67% (8/75) 4.48 0.0 0.0
GO:1901363 heterocyclic compound binding 28.0% (21/75) 2.07 0.0 0.0
GO:0097159 organic cyclic compound binding 28.0% (21/75) 2.07 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 13.33% (10/75) 3.42 0.0 0.0
GO:0044281 small molecule metabolic process 12.0% (9/75) 3.7 0.0 0.0
GO:0097367 carbohydrate derivative binding 18.67% (14/75) 2.61 0.0 1e-06
GO:0046483 heterocycle metabolic process 13.33% (10/75) 3.26 0.0 1e-06
GO:0006725 cellular aromatic compound metabolic process 13.33% (10/75) 3.26 0.0 1e-06
GO:1901360 organic cyclic compound metabolic process 13.33% (10/75) 3.21 0.0 1e-06
GO:0003674 molecular_function 48.0% (36/75) 1.21 0.0 1e-06
GO:0035639 purine ribonucleoside triphosphate binding 17.33% (13/75) 2.55 0.0 3e-06
GO:0032555 purine ribonucleotide binding 17.33% (13/75) 2.53 0.0 3e-06
GO:0032553 ribonucleotide binding 17.33% (13/75) 2.51 0.0 3e-06
GO:0043167 ion binding 22.67% (17/75) 2.07 0.0 3e-06
GO:0017076 purine nucleotide binding 17.33% (13/75) 2.43 1e-06 6e-06
GO:0005524 ATP binding 14.67% (11/75) 2.71 1e-06 7e-06
GO:0043168 anion binding 17.33% (13/75) 2.39 1e-06 8e-06
GO:0000166 nucleotide binding 17.33% (13/75) 2.37 1e-06 8e-06
GO:1901265 nucleoside phosphate binding 17.33% (13/75) 2.37 1e-06 8e-06
GO:0032559 adenyl ribonucleotide binding 14.67% (11/75) 2.67 1e-06 8e-06
GO:0036094 small molecule binding 17.33% (13/75) 2.3 2e-06 1.3e-05
GO:0030554 adenyl nucleotide binding 14.67% (11/75) 2.56 2e-06 1.6e-05
GO:0009987 cellular process 25.33% (19/75) 1.66 5e-06 3.1e-05
GO:0008150 biological_process 30.67% (23/75) 1.4 8e-06 5e-05
GO:0003676 nucleic acid binding 13.33% (10/75) 2.22 5.5e-05 0.000333
GO:0006807 nitrogen compound metabolic process 18.67% (14/75) 1.72 7.2e-05 0.000427
GO:0034641 cellular nitrogen compound metabolic process 13.33% (10/75) 2.13 9.1e-05 0.000525
GO:0008152 metabolic process 21.33% (16/75) 1.47 0.000156 0.000879
GO:0071704 organic substance metabolic process 20.0% (15/75) 1.52 0.000181 0.000999
GO:0044237 cellular metabolic process 17.33% (13/75) 1.64 0.000242 0.00131
GO:0006886 intracellular protein transport 4.0% (3/75) 4.58 0.000281 0.001485
GO:0043170 macromolecule metabolic process 16.0% (12/75) 1.67 0.000346 0.001795
GO:0044238 primary metabolic process 18.67% (14/75) 1.5 0.000367 0.001863
GO:0015031 protein transport 4.0% (3/75) 4.11 0.000719 0.003579
GO:0033036 macromolecule localization 4.0% (3/75) 4.06 0.000809 0.003736
GO:0008104 protein localization 4.0% (3/75) 4.06 0.000809 0.003736
GO:0070727 cellular macromolecule localization 4.0% (3/75) 4.06 0.000809 0.003736
GO:1901564 organonitrogen compound metabolic process 14.67% (11/75) 1.61 0.000872 0.003818
GO:0045184 establishment of protein localization 4.0% (3/75) 4.07 0.00079 0.00386
GO:0016072 rRNA metabolic process 2.67% (2/75) 5.53 0.000871 0.003882
GO:0006364 rRNA processing 2.67% (2/75) 5.53 0.000871 0.003882
GO:0046907 intracellular transport 4.0% (3/75) 3.9 0.001099 0.004652
GO:0051649 establishment of localization in cell 4.0% (3/75) 3.9 0.001099 0.004652
GO:0071705 nitrogen compound transport 4.0% (3/75) 3.83 0.001266 0.00527
GO:0031207 Sec62/Sec63 complex 1.33% (1/75) 9.44 0.001443 0.00582
GO:0031204 post-translational protein targeting to membrane, translocation 1.33% (1/75) 9.44 0.001443 0.00582
GO:0071702 organic substance transport 4.0% (3/75) 3.7 0.001645 0.006528
GO:0051641 cellular localization 4.0% (3/75) 3.56 0.002157 0.00843
GO:0034470 ncRNA processing 2.67% (2/75) 4.65 0.002906 0.010853
GO:0070037 rRNA (pseudouridine) methyltransferase activity 1.33% (1/75) 8.44 0.002885 0.010937
GO:0003879 ATP phosphoribosyltransferase activity 1.33% (1/75) 8.44 0.002885 0.010937
GO:0003824 catalytic activity 20.0% (15/75) 1.13 0.002974 0.010947
GO:0008652 amino acid biosynthetic process 2.67% (2/75) 4.6 0.003117 0.01131
GO:0032469 endoplasmic reticulum calcium ion homeostasis 1.33% (1/75) 7.85 0.004324 0.01356
GO:0004814 arginine-tRNA ligase activity 1.33% (1/75) 7.85 0.004324 0.01356
GO:0070475 rRNA base methylation 1.33% (1/75) 7.85 0.004324 0.01356
GO:0000154 rRNA modification 1.33% (1/75) 7.85 0.004324 0.01356
GO:0071806 protein transmembrane transport 1.33% (1/75) 7.85 0.004324 0.01356
GO:0006420 arginyl-tRNA aminoacylation 1.33% (1/75) 7.85 0.004324 0.01356
GO:0065002 intracellular protein transmembrane transport 1.33% (1/75) 7.85 0.004324 0.01356
GO:0000502 proteasome complex 1.33% (1/75) 7.85 0.004324 0.01356
GO:0009894 regulation of catabolic process 1.33% (1/75) 7.85 0.004324 0.01356
GO:0042176 regulation of protein catabolic process 1.33% (1/75) 7.85 0.004324 0.01356
GO:0031167 rRNA methylation 1.33% (1/75) 7.85 0.004324 0.01356
GO:0140102 catalytic activity, acting on a rRNA 1.33% (1/75) 7.44 0.005762 0.017217
GO:0006874 cellular calcium ion homeostasis 1.33% (1/75) 7.44 0.005762 0.017217
GO:0008649 rRNA methyltransferase activity 1.33% (1/75) 7.44 0.005762 0.017217
GO:0055074 calcium ion homeostasis 1.33% (1/75) 7.44 0.005762 0.017217
GO:0140535 intracellular protein-containing complex 2.67% (2/75) 4.1 0.006188 0.018276
GO:0061608 nuclear import signal receptor activity 1.33% (1/75) 7.11 0.007197 0.021012
GO:0005575 cellular_component 13.33% (10/75) 1.28 0.007751 0.022372
GO:0006528 asparagine metabolic process 1.33% (1/75) 6.85 0.00863 0.022834
GO:0006606 protein import into nucleus 1.33% (1/75) 6.85 0.00863 0.022834
GO:0006529 asparagine biosynthetic process 1.33% (1/75) 6.85 0.00863 0.022834
GO:0034504 protein localization to nucleus 1.33% (1/75) 6.85 0.00863 0.022834
GO:0051170 import into nucleus 1.33% (1/75) 6.85 0.00863 0.022834
GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity 1.33% (1/75) 6.85 0.00863 0.022834
GO:1905369 endopeptidase complex 1.33% (1/75) 6.85 0.00863 0.022834
GO:0140142 nucleocytoplasmic carrier activity 1.33% (1/75) 6.85 0.00863 0.022834
GO:0046394 carboxylic acid biosynthetic process 2.67% (2/75) 3.78 0.009467 0.02479
GO:0000105 histidine biosynthetic process 1.33% (1/75) 6.44 0.011491 0.026059
GO:0042592 homeostatic process 1.33% (1/75) 6.44 0.011491 0.026059
GO:0006875 cellular metal ion homeostasis 1.33% (1/75) 6.44 0.011491 0.026059
GO:0019725 cellular homeostasis 1.33% (1/75) 6.44 0.011491 0.026059
GO:0048878 chemical homeostasis 1.33% (1/75) 6.44 0.011491 0.026059
GO:0050801 monoatomic ion homeostasis 1.33% (1/75) 6.44 0.011491 0.026059
GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor 1.33% (1/75) 6.44 0.011491 0.026059
GO:0055080 monoatomic cation homeostasis 1.33% (1/75) 6.44 0.011491 0.026059
GO:0055082 cellular chemical homeostasis 1.33% (1/75) 6.44 0.011491 0.026059
GO:0098771 inorganic ion homeostasis 1.33% (1/75) 6.44 0.011491 0.026059
GO:0006873 cellular monoatomic ion homeostasis 1.33% (1/75) 6.44 0.011491 0.026059
GO:0030003 cellular monoatomic cation homeostasis 1.33% (1/75) 6.44 0.011491 0.026059
GO:0006547 histidine metabolic process 1.33% (1/75) 6.44 0.011491 0.026059
GO:0055065 metal ion homeostasis 1.33% (1/75) 6.44 0.011491 0.026059
GO:0006030 chitin metabolic process 1.33% (1/75) 6.27 0.012918 0.027343
GO:0046348 amino sugar catabolic process 1.33% (1/75) 6.27 0.012918 0.027343
GO:0006032 chitin catabolic process 1.33% (1/75) 6.27 0.012918 0.027343
GO:0140104 molecular carrier activity 1.33% (1/75) 6.27 0.012918 0.027343
GO:0006040 amino sugar metabolic process 1.33% (1/75) 6.27 0.012918 0.027343
GO:1901071 glucosamine-containing compound metabolic process 1.33% (1/75) 6.27 0.012918 0.027343
GO:1901072 glucosamine-containing compound catabolic process 1.33% (1/75) 6.27 0.012918 0.027343
GO:0003677 DNA binding 5.33% (4/75) 2.16 0.012595 0.02831
GO:0016053 organic acid biosynthetic process 2.67% (2/75) 3.64 0.011339 0.029389
GO:0008061 chitin binding 1.33% (1/75) 6.11 0.014343 0.029861
GO:0001510 RNA methylation 1.33% (1/75) 6.11 0.014343 0.029861
GO:0000049 tRNA binding 1.33% (1/75) 5.98 0.015766 0.032295
GO:0006396 RNA processing 2.67% (2/75) 3.39 0.01575 0.032524
GO:1905368 peptidase complex 1.33% (1/75) 5.74 0.018606 0.036635
GO:0006026 aminoglycan catabolic process 1.33% (1/75) 5.74 0.018606 0.036635
GO:0031072 heat shock protein binding 1.33% (1/75) 5.74 0.018606 0.036635
GO:0006913 nucleocytoplasmic transport 1.33% (1/75) 5.74 0.018606 0.036635
GO:0051169 nuclear transport 1.33% (1/75) 5.74 0.018606 0.036635
GO:0006022 aminoglycan metabolic process 1.33% (1/75) 5.63 0.020023 0.038239
GO:0003697 single-stranded DNA binding 1.33% (1/75) 5.63 0.020023 0.038239
GO:0016763 pentosyltransferase activity 1.33% (1/75) 5.63 0.020023 0.038239
GO:0043414 macromolecule methylation 1.33% (1/75) 5.63 0.020023 0.038239
GO:0044283 small molecule biosynthetic process 2.67% (2/75) 3.17 0.021029 0.039861
GO:0009067 aspartate family amino acid biosynthetic process 1.33% (1/75) 5.53 0.021438 0.040335
GO:0008168 methyltransferase activity 2.67% (2/75) 3.13 0.022058 0.041196
GO:0009066 aspartate family amino acid metabolic process 1.33% (1/75) 5.44 0.022851 0.042366
GO:0031968 organelle outer membrane 1.33% (1/75) 5.35 0.024262 0.044335
GO:0005741 mitochondrial outer membrane 1.33% (1/75) 5.35 0.024262 0.044335
GO:0016741 transferase activity, transferring one-carbon groups 2.67% (2/75) 3.05 0.024447 0.044354
GO:0008173 RNA methyltransferase activity 1.33% (1/75) 5.19 0.027078 0.048778
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (75) (download table)

InterPro Domains

GO Terms

Family Terms