View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | - | -0.94 | 0.43 | -1.12 | -5.74 | -1.15 | -22.23 | -2.42 | -4.71 | -0.39 | -0.51 | 0.22 | 0.68 | -1.3 | -1.42 | - | -1.06 | -4.4 | -0.18 | - | -33.94 | -24.88 | -24.25 | - | -0.39 | - | - | - | -1.16 | 1.66 | 1.82 | 1.66 | 0.86 | 0.83 | 0.32 | 1.37 | 1.07 | 1.88 | 0.22 | 2.13 | 0.27 | -1.51 | -3.5 | -8.03 | -15.35 | 0.27 | 1.25 | 1.41 | -0.08 | 0.59 | 1.22 | 0.51 | -0.88 | 0.96 | -2.54 | |
MA_8091373g0010 (BIN5) |
-1.11 | 1.43 | -2.43 | 1.14 | -0.34 | -2.05 | -4.8 | -0.04 | -0.47 | -5.2 | -3.71 | -2.51 | -0.74 | -2.38 | -1.55 | 0.18 | - | -0.25 | - | 0.01 | 1.05 | 1.47 | -0.31 | -1.27 | 0.37 | -1.43 | 0.31 | -0.74 | -2.6 | -0.31 | 1.13 | 1.59 | 1.32 | 1.09 | -0.56 | 0.08 | 1.59 | 0.49 | 1.3 | 0.36 | 1.61 | -0.25 | -0.47 | - | 1.19 | -0.86 | -2.17 | 0.82 | 0.57 | - | -1.07 | -2.11 | - | -1.53 | -1.2 | -0.7 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
