View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.12 | -1.33 | -1.28 | -0.46 | -1.0 | -1.81 | -0.59 | -0.43 | -0.02 | -0.36 | -1.1 | -1.5 | -0.74 | -0.61 | -1.34 | -0.87 | - | -0.95 | -0.12 | 0.29 | -0.85 | -0.3 | -0.31 | -0.49 | -0.39 | 0.34 | 0.21 | -0.04 | 0.17 | 0.24 | 0.84 | 0.59 | 0.51 | 0.85 | 0.55 | 0.62 | 0.63 | 0.42 | 0.55 | 0.51 | 0.71 | 0.25 | 0.48 | 0.39 | 0.44 | -0.23 | -0.43 | -0.19 | -0.0 | 0.4 | 0.33 | 0.54 | 0.52 | -0.05 | 0.52 | 0.05 | |
| -0.68 | -1.79 | -4.82 | -1.49 | -2.96 | -4.73 | - | -1.14 | -0.26 | 0.11 | -1.08 | -0.95 | -0.92 | -1.27 | -1.23 | - | - | -5.0 | 0.26 | -0.31 | -0.66 | -0.9 | -0.44 | -0.45 | -1.35 | 0.31 | 0.23 | -0.06 | 0.09 | -0.26 | 0.96 | 0.78 | 0.86 | 0.98 | 0.97 | 1.01 | 0.89 | 0.92 | 0.9 | 0.74 | 0.88 | 0.46 | 0.17 | 0.08 | 0.45 | -0.59 | -0.65 | 0.02 | 0.07 | 0.5 | 0.44 | 0.77 | 0.81 | 0.44 | 0.84 | 0.32 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
