View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.87 | 0.88 | -1.44 | -0.87 | -5.26 | - | - | -0.57 | -1.8 | -0.69 | -2.91 | 0.09 | 1.51 | -0.09 | 0.09 | - | - | -0.95 | -0.69 | -1.24 | -2.19 | -1.64 | -0.28 | -1.89 | - | 0.42 | -0.98 | -2.31 | -4.02 | - | 0.89 | 0.83 | 1.15 | 1.33 | 1.45 | 1.49 | 0.97 | 1.56 | 1.42 | 1.04 | 0.77 | 0.82 | 0.35 | 0.32 | -2.39 | -0.96 | -1.4 | -2.83 | -2.25 | -0.5 | 0.25 | 0.29 | -0.6 | 0.03 | 0.2 | 1.49 | |
| 0.9 | - | - | -4.24 | - | - | - | -4.16 | -1.23 | -1.15 | 0.47 | 0.82 | 2.38 | -0.73 | 0.76 | - | - | - | -2.62 | -3.31 | - | - | -3.26 | - | - | 0.02 | - | -2.37 | - | - | 1.35 | 1.57 | 1.51 | 1.78 | 1.92 | 0.41 | 1.07 | 1.84 | 1.67 | 0.98 | 0.82 | 1.04 | 0.32 | -1.09 | -1.08 | - | -1.59 | -2.14 | -1.81 | -0.97 | -1.14 | -1.11 | -0.64 | 0.03 | -1.19 | 1.49 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
