View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.4 | -4.46 | - | - | - | -6.16 | - | - | -2.53 | -0.97 | - | - | -4.45 | -4.42 | - | -2.39 | - | - | -0.16 | 1.61 | 0.57 | -0.2 | -2.25 | 0.3 | 1.65 | -0.32 | 1.61 | 2.29 | 1.54 | 1.86 | 1.15 | -0.18 | 0.42 | 0.52 | 0.3 | 0.68 | 1.02 | 0.94 | 0.84 | 0.65 | 1.89 | 0.26 | -0.36 | -1.37 | -2.11 | -1.7 | 0.38 | -3.01 | -2.06 | -2.66 | -0.49 | 0.58 | -1.13 | -1.65 | -0.71 | -7.93 | |
| -0.24 | - | - | - | - | - | - | - | -1.64 | -3.75 | - | - | - | - | - | - | - | - | -3.54 | 1.14 | 0.44 | -0.7 | -3.73 | 0.4 | 1.35 | -0.61 | 1.39 | 2.28 | 1.98 | 2.4 | 1.52 | -0.46 | 0.97 | 0.5 | -0.46 | 1.11 | 1.01 | 1.82 | 0.87 | 0.84 | 1.93 | 0.32 | 0.11 | -0.84 | -2.21 | -2.59 | 0.06 | -4.42 | -2.07 | - | -1.97 | -0.04 | -1.89 | -2.98 | -2.71 | - | |
| -0.73 | - | - | - | -3.32 | - | - | -5.0 | -3.1 | -1.69 | - | - | -4.87 | - | -5.36 | - | - | - | -0.86 | 1.31 | 0.93 | -0.63 | -2.51 | 0.43 | 2.14 | -0.46 | 1.54 | 2.58 | 1.44 | 1.94 | 1.28 | -0.47 | 0.89 | 0.55 | -0.21 | 0.62 | 0.47 | 1.4 | 1.14 | 0.73 | 2.13 | 0.35 | -0.39 | -1.74 | -3.18 | -1.66 | -0.64 | -4.22 | -2.71 | -2.25 | -2.32 | 0.03 | -2.32 | -1.69 | -1.24 | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
