View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.26 | 0.46 | -5.35 | -5.02 | -7.06 | -5.61 | - | 0.38 | -1.26 | 1.81 | -2.82 | -1.35 | -0.21 | -2.17 | -0.88 | -7.85 | - | -5.91 | 1.75 | -0.5 | 0.21 | 0.14 | 0.35 | 0.03 | 0.2 | -0.11 | -0.32 | 0.18 | -0.59 | 0.18 | -0.02 | -0.05 | 0.08 | 0.41 | 0.46 | 0.48 | 0.35 | 0.57 | 0.37 | 0.3 | 0.46 | 0.13 | 0.55 | -0.26 | 0.92 | 0.37 | -0.11 | -0.27 | -0.25 | 0.16 | -0.17 | 0.21 | -0.07 | 0.44 | 0.61 | 0.64 | |
| 0.26 | 0.46 | -5.35 | -5.02 | -7.06 | -5.61 | - | 0.38 | -1.26 | 1.81 | -2.82 | -1.35 | -0.21 | -2.17 | -0.88 | -7.85 | - | -5.91 | 1.75 | -0.5 | 0.21 | 0.14 | 0.35 | 0.03 | 0.2 | -0.11 | -0.32 | 0.18 | -0.59 | 0.18 | -0.02 | -0.05 | 0.08 | 0.41 | 0.46 | 0.48 | 0.35 | 0.57 | 0.37 | 0.3 | 0.46 | 0.13 | 0.55 | -0.26 | 0.92 | 0.37 | -0.11 | -0.27 | -0.25 | 0.16 | -0.17 | 0.21 | -0.07 | 0.44 | 0.61 | 0.64 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
