View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -2.91 | -3.02 | 1.96 | 0.01 | 2.27 | 0.29 | 1.26 | -0.93 | 1.57 | - | 3.31 | 2.86 | 2.64 | 2.41 | 2.11 | 0.58 | - | 0.02 | - | - | -0.49 | - | -2.33 | - | - | -3.53 | - | - | - | -2.97 | -4.71 | - | - | - | - | - | - | - | - | - | - | - | -2.02 | -3.04 | - | -1.83 | -2.73 | -6.49 | -3.27 | -1.62 | -2.11 | -2.23 | -1.97 | -3.91 | -2.15 | - | |
| - | - | - | - | - | - | - | - | 1.9 | -2.06 | 3.61 | 1.73 | 3.2 | 4.07 | 2.5 | - | - | - | 0.04 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -0.12 | - | - | - | - | - | -0.15 | - | - | - | - | - | - | - | - | -0.39 | -0.86 | -0.5 | - | - | - | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
