View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | - | 1.03 | 0.87 | 1.51 | 0.55 | - | - | 2.4 | -5.96 | -1.64 | 1.33 | 0.94 | 0.6 | 0.43 | - | - | - | -0.43 | - | - | - | 1.37 | 0.24 | - | 2.39 | - | - | - | - | -0.66 | -1.64 | 0.59 | -0.56 | - | 0.36 | -0.43 | -3.55 | 0.11 | -1.2 | - | -4.29 | 1.52 | 1.92 | 2.17 | - | - | 1.22 | 1.29 | -1.39 | -2.09 | 0.68 | -17.33 | - | -2.55 | -5.0 | |
MA_7604366g0010 (PP2-B6) |
- | - | -0.85 | 0.72 | -0.89 | 0.17 | - | -0.64 | 2.91 | -0.17 | -9.71 | -15.48 | -0.28 | 0.19 | -0.89 | - | - | -1.21 | 1.36 | - | - | - | - | -1.15 | -1.39 | 2.18 | -4.04 | - | - | -1.6 | 1.04 | 0.46 | -1.46 | -0.21 | 1.15 | 0.02 | 0.81 | 0.43 | 0.45 | 1.21 | 1.24 | -1.09 | 0.83 | 0.08 | -0.26 | - | - | 1.38 | 2.8 | -1.1 | -12.83 | - | -18.66 | -10.66 | - | -0.65 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
