View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3.43 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.1 | - | - | - | - | - | - | -7.07 | - | - | - | - | 1.1 | 1.2 | 1.58 | 1.87 | 1.75 | -0.17 | 2.35 | 1.35 | 2.24 | 1.75 | 1.94 | 1.63 | - | - | - | - | - | - | - | - | - | -1.6 | - | - | -1.48 | 2.45 | |
MA_86029g0010 (VPS4) |
3.58 | - | - | - | - | - | - | - | - | - | - | -0.56 | -0.64 | - | - | - | - | - | - | - | - | 0.21 | - | - | - | -4.29 | - | - | - | - | 1.74 | 0.92 | 1.02 | 0.97 | 1.47 | 2.26 | 1.06 | 1.65 | 1.68 | 2.17 | 2.69 | 0.19 | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.06 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
