View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_3340g0010 (OPCL1) |
-0.91 | 0.34 | - | - | -3.42 | - | - | - | -8.42 | - | - | - | - | - | - | - | - | - | -2.81 | -0.34 | -2.4 | -0.86 | -1.21 | -3.74 | 0.02 | -0.71 | 1.15 | -0.32 | 0.35 | -0.04 | 1.59 | 1.67 | 2.33 | 2.01 | 2.12 | 0.4 | 2.71 | 1.37 | 2.06 | 1.28 | 1.48 | 1.15 | -0.47 | -1.18 | 0.05 | 0.15 | -4.12 | -8.48 | -6.27 | - | - | - | - | - | - | - |
| -1.25 | -1.68 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -1.37 | -0.29 | -2.48 | -3.49 | -2.48 | -3.6 | -1.06 | -1.86 | 0.21 | -0.14 | -0.73 | -0.17 | 2.03 | 2.42 | 2.54 | 1.97 | 2.08 | 0.61 | 2.28 | 1.35 | 1.9 | 1.32 | 1.79 | 1.29 | 0.5 | -0.83 | 1.06 | -0.57 | - | - | -7.07 | - | - | - | - | - | - | - | |
| -0.98 | -0.09 | - | - | - | - | - | - | -9.16 | - | - | -5.65 | - | - | -6.03 | - | - | - | -0.66 | -1.28 | -3.79 | -1.22 | -3.21 | -1.74 | -0.87 | -0.98 | 0.45 | -0.21 | -0.04 | -0.09 | 1.69 | 2.14 | 2.22 | 2.12 | 2.03 | 0.48 | 2.52 | 1.19 | 1.72 | 1.35 | 1.76 | 1.45 | 0.05 | -0.81 | 1.11 | 0.5 | -4.7 | -8.45 | -5.87 | - | - | - | - | - | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
