View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | -1.52 | - | 0.12 | -0.57 | - | - | -1.32 | -0.4 | 3.28 | - | 0.18 | -2.16 | 3.04 | -0.23 | - | - | - | 2.57 | - | - | - | - | - | -1.49 | 0.88 | 0.68 | - | -1.56 | - | -1.58 | -1.31 | -2.35 | -2.01 | -2.11 | -0.52 | -0.61 | -1.03 | -0.13 | -2.69 | 0.07 | -0.69 | -0.12 | -3.35 | -0.22 | -2.39 | -1.23 | -1.9 | -1.22 | 0.88 | 0.56 | 2.03 | 0.47 | 0.5 | 1.53 | -1.88 | |
| - | - | - | 0.68 | 1.44 | - | - | -0.03 | -0.3 | 3.28 | - | 0.16 | - | 3.37 | -1.82 | 1.67 | - | - | 2.84 | - | - | - | - | - | - | 0.42 | 0.39 | -0.72 | -0.85 | -0.76 | -0.73 | -0.6 | -1.68 | -1.3 | - | 0.46 | -0.73 | - | - | -1.98 | -0.14 | - | -0.56 | -1.42 | -0.67 | -1.47 | - | -0.28 | 0.35 | 0.43 | - | -0.72 | -0.84 | - | 0.47 | -0.81 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
