View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_218523g0010 (SD2-5) |
0.56 | -0.84 | - | - | - | - | - | -3.45 | -3.71 | 1.33 | - | - | - | -2.41 | -3.02 | - | - | - | 1.37 | -4.33 | -2.51 | 1.06 | -1.29 | - | - | 0.75 | - | - | - | - | -0.27 | -0.15 | -0.08 | 0.8 | -0.21 | -0.83 | 0.37 | -0.38 | 0.25 | 0.57 | 0.35 | -1.05 | -1.83 | -2.46 | -2.0 | 0.55 | 1.03 | 0.17 | 0.27 | 1.14 | 1.51 | 2.68 | 1.48 | 1.5 | 2.82 | -0.05 |
| 0.14 | 0.03 | - | - | - | - | - | - | -3.61 | -0.26 | - | - | - | - | - | - | - | - | 0.56 | - | 0.82 | 0.52 | - | - | - | 0.89 | - | - | - | - | -0.29 | -0.91 | -0.22 | 0.35 | - | -0.96 | -1.01 | - | -0.16 | -0.5 | - | - | -2.94 | -1.58 | -0.84 | 1.29 | 0.32 | 0.15 | -0.08 | 1.98 | 1.91 | 3.17 | 0.71 | 1.72 | 3.37 | 0.7 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
