View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.02 | 2.49 | -1.09 | -3.31 | -3.09 | -2.77 | - | 0.31 | -1.46 | -1.62 | -1.31 | -2.39 | -2.45 | -1.34 | -2.46 | - | - | - | -1.03 | -0.7 | 1.09 | -0.39 | 1.02 | -2.1 | -1.41 | -0.51 | -0.05 | -1.22 | -0.42 | -0.72 | 1.05 | 1.01 | 1.15 | 0.25 | 0.43 | 0.75 | 0.82 | 0.81 | 0.73 | 0.31 | 0.97 | 0.59 | -1.41 | -0.67 | 0.71 | 0.63 | -0.48 | 0.16 | -0.05 | -0.81 | 0.8 | 0.35 | -0.92 | -1.2 | 0.91 | 0.47 | |
| -1.33 | 1.45 | -1.22 | -0.69 | -5.04 | -1.88 | -1.25 | 0.17 | -0.19 | -3.12 | -3.74 | -1.21 | -1.06 | 0.03 | -1.97 | 0.89 | - | - | -1.97 | 0.44 | 0.35 | -0.49 | -0.39 | -1.09 | -1.73 | -1.16 | -0.24 | -0.5 | -0.8 | -0.54 | 1.26 | 0.57 | 1.08 | 0.54 | 0.73 | 0.36 | 1.26 | 0.9 | 1.24 | 0.98 | 1.1 | 1.0 | 0.0 | 0.17 | 0.35 | 0.58 | -1.89 | 0.47 | 0.28 | -1.97 | 0.59 | 0.53 | -2.16 | -2.64 | -0.22 | 0.19 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
