View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -7.45 | -1.27 | -2.3 | -1.71 | -3.58 | -4.94 | -3.56 | -3.57 | -5.25 | -1.81 | -5.65 | -5.87 | -4.08 | -2.69 | -5.41 | -3.86 | - | -4.53 | -4.13 | 0.84 | -1.2 | -4.95 | 1.78 | -0.34 | 1.87 | -5.73 | 1.84 | 0.78 | 1.32 | 0.84 | 0.96 | 0.38 | 0.74 | 0.88 | 1.5 | 1.18 | 1.13 | 2.1 | 1.56 | 2.47 | 1.38 | 0.21 | - | - | - | -4.45 | -3.46 | -1.34 | -1.86 | 0.54 | -0.74 | -3.56 | -2.18 | -3.05 | -1.85 | -3.22 | |
| - | - | - | -0.9 | 0.23 | -2.02 | - | -2.27 | - | -1.69 | - | - | 1.17 | - | - | 0.01 | - | 0.88 | -2.54 | 1.51 | -1.26 | - | 1.9 | 0.62 | 1.73 | - | 0.31 | -0.38 | 2.07 | 0.58 | 0.98 | 0.43 | 0.72 | 1.32 | 1.25 | 1.03 | 1.22 | 1.59 | 1.18 | 1.91 | 0.88 | 0.78 | -3.44 | - | - | - | - | -3.31 | -3.93 | -1.47 | -0.22 | - | - | - | -1.24 | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
