View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | - | - | - | - | - | - | 3.49 | -3.51 | 0.56 | -0.19 | 1.3 | 1.82 | -0.16 | 0.39 | - | - | - | 1.27 | - | 2.11 | -0.72 | - | -0.73 | - | 0.65 | - | - | - | - | 1.44 | -0.28 | 0.04 | 2.11 | -0.99 | 0.75 | 1.1 | 1.37 | 0.71 | 1.1 | 1.39 | 0.66 | - | - | - | -1.8 | - | -3.33 | -3.32 | - | - | -1.74 | - | - | - | - | |
| -0.56 | - | -0.78 | 0.83 | -4.27 | - | - | 2.24 | -3.32 | -1.84 | - | 1.74 | 0.2 | 1.82 | 2.16 | - | - | - | -0.85 | 1.85 | 0.21 | -0.52 | - | - | 0.74 | 0.63 | 1.01 | 1.09 | -0.23 | 0.05 | 1.06 | 0.39 | -0.45 | 1.13 | 0.88 | 0.15 | 0.28 | 0.22 | 0.46 | 0.48 | -0.03 | 0.63 | -2.4 | -2.94 | -0.86 | -2.76 | -0.12 | -2.08 | -1.5 | - | -2.96 | - | - | - | - | -1.17 | |
MA_327084g0010 (UGT72B3) |
-0.37 | -4.87 | -4.65 | 0.46 | -5.15 | -3.78 | - | 2.83 | -3.65 | -1.71 | - | -0.54 | -1.1 | -0.54 | 1.17 | - | - | -3.84 | -1.46 | 1.85 | -0.02 | 0.26 | -2.67 | -2.78 | 1.39 | 0.74 | 1.74 | 0.3 | 0.26 | 0.13 | 0.91 | 0.71 | 0.85 | 1.4 | 0.68 | 0.84 | 0.82 | -0.02 | 1.06 | 0.96 | 0.96 | 0.01 | -3.39 | -3.89 | -0.52 | -2.81 | 0.0 | -1.42 | -1.18 | -4.42 | -5.59 | -5.64 | -5.84 | - | -5.58 | -1.38 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
