View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | 1.1 | - | - | - | - | - | - | - | 0.14 | - | -3.83 | 0.26 | - | -2.23 | -1.33 | - | - | -0.56 | 0.7 | - | - | - | - | -1.19 | -3.1 | -1.03 | -0.13 | -1.27 | 0.63 | 1.38 | 1.55 | 1.38 | 1.58 | 2.72 | 2.03 | 2.04 | 1.47 | 2.17 | 1.94 | 1.2 | 2.01 | -4.19 | - | - | - | - | -0.65 | -0.84 | - | - | - | - | - | -4.01 | - | |
| - | 0.66 | - | - | -0.03 | -0.88 | 1.64 | - | -4.85 | -0.16 | - | -2.11 | -0.1 | -1.97 | -2.94 | 0.71 | - | 2.57 | -1.4 | 0.63 | - | - | - | - | - | -2.33 | 0.86 | 0.04 | - | -1.13 | 0.97 | 0.74 | 0.79 | 1.34 | 2.37 | 1.49 | 1.57 | 1.23 | 2.12 | 1.07 | 0.83 | 1.88 | - | - | - | - | - | -0.73 | -0.66 | - | - | - | - | - | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
