View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_10159692g0010 (C4H) |
2.12 | 0.91 | -0.18 | -2.52 | -0.42 | -3.28 | - | 2.72 | -1.86 | -1.37 | -0.98 | -1.73 | -1.72 | -2.59 | -1.79 | -3.91 | - | -6.1 | -1.84 | -1.93 | 1.16 | 0.76 | 0.08 | 0.05 | -2.32 | -0.65 | -4.34 | -5.89 | -5.17 | -3.35 | 1.56 | 0.27 | 1.53 | 1.04 | 1.66 | 1.78 | -0.36 | 1.24 | 0.04 | 0.58 | 0.42 | -0.23 | - | - | - | 2.46 | 1.01 | -9.43 | - | -2.58 | -6.12 | - | -4.22 | -3.84 | -6.21 | - |
MA_106581g0010 (AIR3) |
2.88 | 2.5 | - | - | - | - | - | 2.37 | -0.56 | -0.32 | - | -3.85 | -0.85 | - | -4.24 | - | - | - | -2.69 | - | 1.37 | -4.08 | - | - | - | 0.61 | - | - | - | - | 1.07 | 0.53 | 1.82 | 0.55 | 1.72 | 1.11 | 0.95 | 1.11 | 0.7 | -0.46 | 1.4 | 0.87 | -0.41 | -1.69 | 0.29 | -0.88 | 0.23 | -2.41 | 0.13 | -2.56 | -1.5 | -3.1 | -2.51 | -4.04 | -2.4 | -3.25 |
| 2.47 | -0.45 | - | -0.23 | -0.62 | - | - | 2.29 | -4.02 | 0.27 | -1.38 | - | -2.09 | - | -0.26 | - | - | - | -0.4 | -0.08 | 1.08 | 1.05 | 0.34 | 0.64 | 1.39 | -0.32 | -1.25 | -0.36 | -0.49 | 0.19 | 0.39 | -0.29 | 1.73 | 0.08 | -1.15 | 1.16 | 0.71 | 0.48 | -0.64 | -1.25 | 0.87 | -1.28 | -2.67 | - | - | 1.51 | -1.16 | -4.8 | -2.24 | -0.51 | -0.62 | 0.29 | 0.18 | -0.09 | 0.6 | -3.74 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
