View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.23 | -3.18 | - | -5.58 | -6.8 | -4.93 | - | -2.18 | 0.45 | 1.1 | -2.03 | -1.59 | -0.17 | -1.09 | -1.49 | - | - | -6.79 | 2.41 | 0.81 | 1.91 | 1.23 | -0.45 | 0.32 | 1.83 | 0.08 | -0.76 | 0.59 | -0.28 | 0.15 | 0.25 | -0.05 | -0.54 | -0.04 | -0.13 | -0.19 | 0.08 | 0.07 | 0.29 | 0.25 | 0.67 | -1.04 | 0.35 | -0.52 | 0.68 | 0.68 | 1.4 | -0.56 | 0.78 | -1.98 | -2.55 | -1.34 | -2.07 | -0.39 | -0.86 | -4.22 | |
| 1.18 | -2.51 | - | - | - | - | - | -2.31 | 0.45 | 2.81 | -0.24 | -0.33 | 1.38 | -0.22 | -1.56 | - | - | - | 3.54 | - | 1.02 | -3.36 | - | -0.84 | - | 0.86 | - | -2.42 | -1.55 | - | -0.25 | -1.56 | -2.12 | - | -0.87 | -0.82 | 0.1 | 0.72 | -0.85 | -0.13 | 0.95 | -2.44 | 0.04 | -0.6 | 2.02 | 0.48 | -1.22 | 0.32 | 1.53 | -1.53 | - | -2.34 | -1.21 | -0.42 | -1.24 | -2.55 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
