View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_561902g0010 (AHG3) |
-1.07 | 4.06 | -4.21 | -5.79 | - | -3.36 | - | -1.74 | 1.66 | 0.52 | - | -6.04 | -1.18 | - | -6.43 | - | - | - | 0.62 | - | -2.9 | -2.54 | -0.9 | 0.28 | - | 0.27 | - | - | - | - | 1.18 | -0.96 | 0.28 | 0.21 | -0.13 | 1.37 | 0.13 | 0.57 | -0.17 | 1.57 | -0.51 | -0.51 | 1.01 | 0.84 | 1.31 | -0.19 | -3.55 | -0.48 | -1.15 | -4.43 | -5.14 | -6.19 | -4.42 | -6.41 | -6.14 | 1.76 |
MA_906876g0010 (HAI3) |
-1.97 | 4.84 | - | -5.25 | - | - | - | -2.21 | 0.84 | -0.6 | - | -5.5 | - | - | -3.92 | - | - | - | -0.17 | - | -3.68 | -1.62 | -0.98 | 0.69 | - | -0.24 | - | - | - | - | 0.81 | -1.45 | -0.96 | -0.7 | -0.19 | 0.32 | -0.56 | 0.1 | -0.93 | 0.48 | -0.82 | -1.16 | 0.62 | 0.31 | 0.81 | -0.11 | -2.27 | -0.9 | -1.45 | -3.35 | -4.14 | -4.09 | -3.55 | -4.38 | - | 1.65 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
