View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_29075g0010 (ACA8) |
-1.2 | -1.73 | - | -4.17 | -5.08 | - | - | 2.15 | -0.56 | 2.0 | -0.2 | -2.09 | -2.75 | -5.04 | -2.52 | - | - | - | 2.08 | -0.85 | 1.64 | -2.27 | 0.87 | -2.57 | -2.69 | 0.16 | -1.56 | -2.66 | -0.31 | -1.42 | 0.87 | 0.81 | 1.16 | 0.89 | 0.97 | 0.6 | 0.68 | 1.34 | 1.29 | 0.72 | 0.74 | 0.3 | 0.2 | 0.44 | 0.52 | -0.27 | -0.52 | -0.1 | 0.14 | -3.24 | -0.92 | -1.4 | -4.77 | -3.1 | -1.35 | -2.14 |
MA_815867g0010 (CIF1) |
-0.68 | -1.2 | - | -2.48 | - | - | - | 2.29 | -0.76 | 1.5 | 0.12 | -1.14 | -0.79 | -1.68 | -1.85 | -3.24 | - | - | 1.52 | -1.79 | 1.55 | -2.77 | 1.67 | -3.14 | -1.45 | -0.12 | -2.02 | -1.55 | -1.64 | -0.35 | 0.73 | 0.78 | 1.05 | 1.28 | 0.73 | 0.88 | 0.7 | 0.98 | 0.74 | 0.44 | 0.06 | 0.82 | -0.1 | -0.02 | 0.46 | -0.77 | -1.67 | -0.41 | -0.11 | -1.03 | 0.14 | -0.72 | -1.15 | -0.82 | -0.18 | -1.48 |
MA_9527432g0010 (CIF1) |
-0.04 | -2.74 | - | - | - | - | - | 1.48 | -2.73 | 2.57 | - | -0.79 | -1.32 | - | -2.19 | - | - | - | 2.0 | - | 1.75 | - | -2.53 | - | - | 0.04 | 0.04 | -2.65 | -1.78 | - | 1.49 | 1.54 | 1.75 | 1.0 | 1.72 | 0.18 | 0.91 | 1.78 | 1.14 | 0.6 | 1.26 | 0.85 | -0.18 | -0.09 | 0.85 | -2.39 | - | -0.43 | -0.69 | - | -3.7 | -0.99 | -3.84 | - | -2.5 | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
