View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | -4.73 | - | - | - | - | - | - | -5.25 | - | - | - | - | - | - | - | - | - | - | -2.22 | - | -4.2 | - | -3.28 | -5.43 | -2.97 | -1.82 | -5.18 | -4.51 | -4.21 | 1.68 | 0.75 | 1.85 | 2.15 | 1.72 | 1.89 | 1.48 | 1.67 | 2.38 | 0.8 | 3.01 | 0.8 | - | - | - | - | - | 1.14 | 1.13 | - | - | - | -5.11 | - | - | 2.99 | |
| - | 1.88 | - | - | - | - | - | - | 0.56 | - | - | - | 1.32 | - | - | - | - | - | -0.59 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.89 | 2.97 | - | - | - | - | 1.89 | - | 5.1 | |
| 3.11 | -1.68 | - | - | - | - | - | - | -1.07 | -1.72 | - | - | - | - | - | - | - | - | -2.04 | -1.66 | -2.38 | -0.15 | -0.37 | 1.16 | -0.89 | -2.58 | -1.28 | -1.66 | -1.67 | -1.82 | 0.46 | -0.24 | 0.92 | 0.95 | 0.85 | 0.9 | 0.28 | 0.73 | 1.06 | 0.26 | 1.74 | -0.16 | -4.01 | -4.47 | -8.67 | -3.27 | -1.11 | 1.23 | 1.04 | 1.14 | -1.15 | -2.11 | 1.52 | 0.64 | -3.76 | 2.81 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
