View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3.12 | -0.23 | -4.68 | -4.65 | - | - | - | -4.42 | -1.75 | 1.44 | - | - | - | - | -7.9 | -5.0 | - | -4.28 | 0.39 | -1.02 | -0.62 | 1.43 | -0.29 | -1.39 | 0.82 | 3.86 | -0.48 | -1.18 | -1.84 | -0.64 | -0.19 | -0.77 | -0.35 | 0.1 | -0.2 | -0.16 | -0.59 | 0.02 | -1.42 | -0.33 | -0.32 | -0.21 | -2.71 | -3.22 | -4.18 | 1.24 | 2.3 | -2.31 | -0.51 | -6.71 | - | - | -1.84 | -5.66 | -6.06 | -3.31 | |
| 4.38 | 1.77 | -9.75 | -6.03 | -9.41 | - | - | -3.1 | -3.01 | -1.59 | - | -10.58 | -10.53 | - | - | - | - | -7.94 | -2.62 | -4.03 | 0.16 | 2.13 | 0.29 | -4.54 | -1.9 | 3.02 | -4.14 | -3.81 | -5.02 | -3.39 | -2.36 | -2.82 | -2.35 | -1.93 | -2.4 | -2.73 | -2.71 | -2.08 | -3.22 | -2.44 | -2.36 | -2.43 | -3.44 | -3.19 | -3.76 | 2.33 | 2.85 | -2.43 | -1.01 | -7.99 | - | - | -4.71 | -9.24 | -8.36 | -3.28 | |
| 4.59 | 1.64 | -5.6 | -3.7 | -8.55 | -9.45 | -7.82 | -2.89 | -2.04 | -2.41 | - | - | - | - | - | -8.86 | - | -10.31 | -3.88 | -6.09 | 0.17 | 2.01 | 0.42 | -7.05 | -6.02 | 2.37 | -6.73 | -6.57 | -6.84 | -6.91 | -1.94 | -3.09 | -1.98 | -2.08 | -2.23 | -2.81 | -3.26 | -2.32 | -3.69 | -2.29 | -2.27 | -2.32 | -4.39 | -4.26 | -3.93 | 2.4 | 2.97 | -2.25 | -0.79 | -11.21 | - | -11.16 | -7.95 | -9.23 | - | -3.88 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
