View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -2.56 | -1.58 | -5.36 | -3.43 | - | - | - | -1.85 | 0.05 | 1.29 | - | -3.09 | -3.38 | -6.85 | -2.9 | -4.68 | - | - | 1.68 | 0.67 | 0.23 | 0.99 | -1.51 | 0.87 | 0.98 | -1.93 | -0.27 | -0.36 | 0.11 | -0.5 | 0.71 | 0.91 | 1.25 | 1.23 | 0.88 | 0.84 | 0.67 | 0.66 | 0.07 | 1.04 | 0.95 | 0.19 | -2.18 | -3.96 | -1.16 | 1.63 | 1.82 | -0.51 | 0.16 | 0.65 | -1.98 | -2.47 | 0.19 | 0.71 | -2.39 | -4.03 | |
MA_36134g0020 (SD2-5) |
-2.08 | -1.19 | - | - | -3.46 | - | - | -0.15 | -3.01 | 2.29 | - | -1.2 | - | - | -2.2 | - | - | - | 1.21 | 0.35 | 0.34 | 0.3 | - | - | -1.12 | -1.5 | 0.82 | - | -2.17 | -2.14 | 1.18 | 0.94 | 2.13 | 2.05 | -0.1 | 0.75 | 1.63 | 1.16 | -1.17 | 1.61 | 1.06 | 0.03 | -2.59 | -3.6 | -3.04 | 0.58 | 2.11 | -1.38 | -0.36 | 0.48 | -0.77 | -1.49 | 0.27 | 0.13 | -1.65 | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
