View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.94 | - | - | - | - | - | - | - | 1.06 | 0.15 | - | - | - | - | - | - | - | - | 0.45 | - | -0.52 | 0.96 | - | - | - | -0.24 | - | - | -3.36 | - | 0.68 | -0.22 | 0.43 | 0.53 | 0.59 | 0.31 | -1.86 | 0.43 | -0.86 | 0.27 | 1.09 | -0.54 | 3.29 | 2.52 | 1.22 | 0.21 | 0.97 | 1.13 | 1.05 | -1.7 | 0.53 | 0.94 | -0.97 | -0.59 | 0.62 | -3.23 | |
| -2.81 | -2.22 | -3.32 | - | - | - | - | 0.85 | 0.62 | -0.88 | - | -2.99 | -1.53 | -2.3 | -2.32 | - | - | - | -0.76 | -2.89 | 0.19 | 0.15 | -2.64 | -4.45 | -2.92 | -3.5 | - | -2.86 | -4.58 | - | 0.4 | -0.57 | 0.28 | 0.53 | 0.01 | 0.67 | -0.2 | 0.19 | -0.06 | -0.65 | -0.17 | -1.69 | 3.29 | 2.84 | 1.85 | 1.18 | 0.8 | 0.64 | 0.58 | -1.2 | 0.46 | 1.24 | -1.75 | -1.1 | 1.33 | -5.22 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
