View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_294951g0010 (CYP735A1) |
-2.22 | -2.92 | - | - | - | - | - | -0.95 | -1.44 | -1.93 | - | - | - | - | -4.92 | -3.02 | - | - | -3.0 | -3.95 | 2.44 | -1.74 | -1.13 | - | - | -3.96 | - | - | - | - | 0.63 | 1.24 | 0.97 | 1.22 | 1.5 | 1.11 | 1.25 | 0.19 | 0.51 | 0.51 | 0.15 | 1.48 | 2.41 | 3.1 | 2.52 | 0.58 | 1.37 | -1.46 | -1.95 | -4.79 | - | -4.69 | -4.88 | - | - | - |
| 0.75 | -0.65 | -1.86 | -2.21 | -2.41 | -4.21 | - | 1.29 | -0.92 | -3.08 | - | -5.0 | -3.21 | - | -6.46 | - | - | -2.79 | -4.0 | 0.13 | 2.49 | -0.78 | 0.99 | -1.15 | 0.67 | 0.15 | 0.52 | -0.27 | -1.13 | -0.23 | -0.02 | -0.36 | -0.19 | 0.17 | 0.27 | 0.76 | 0.88 | -0.23 | 0.52 | 0.1 | -0.26 | 0.3 | 2.49 | 2.61 | 1.5 | 1.15 | 0.44 | -0.64 | -0.45 | - | - | - | - | -6.52 | - | - | |
MA_944743g0010 (CYP735A2) |
-1.65 | -1.43 | -3.54 | - | -4.39 | -3.87 | -0.76 | 0.13 | -1.01 | -1.58 | - | -4.41 | -0.77 | - | -3.17 | -1.28 | - | 1.18 | -2.68 | -3.61 | 0.84 | - | -1.97 | - | -2.14 | -1.87 | -1.56 | - | - | - | 1.55 | 1.5 | 1.62 | 1.41 | 1.5 | 1.08 | 1.54 | 0.64 | 0.94 | 1.43 | 1.26 | 1.72 | -1.09 | 2.88 | 2.06 | -2.41 | -1.14 | 0.32 | -0.26 | - | -4.6 | -4.67 | - | - | - | -6.09 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
