View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.86 | -2.42 | -5.37 | -1.43 | - | -3.48 | - | -1.19 | 0.63 | 1.69 | -4.54 | - | - | - | - | -5.69 | - | - | 1.62 | 0.46 | 1.11 | 0.96 | -0.43 | 0.65 | 1.73 | -0.76 | -0.3 | 0.28 | -0.35 | -0.11 | 0.85 | 0.16 | 0.27 | 0.02 | -0.71 | 0.29 | 0.19 | -1.14 | 0.76 | 0.88 | 1.08 | -0.28 | -0.86 | -2.03 | 0.81 | 2.63 | 1.04 | -0.34 | -0.36 | -3.44 | -0.52 | -0.24 | -3.53 | -4.19 | -0.96 | -5.9 | |
| 0.95 | -2.97 | - | -3.33 | - | - | - | -1.77 | 0.26 | 1.94 | - | - | - | - | - | - | - | - | 2.32 | -0.95 | 0.94 | -0.1 | -0.76 | 0.29 | 2.31 | -1.36 | -2.77 | 0.29 | -0.43 | 1.33 | 0.91 | 0.81 | -0.11 | -1.25 | -0.3 | 0.5 | 0.64 | -0.87 | -0.14 | 1.23 | 1.08 | 0.41 | -0.36 | -4.8 | 0.66 | 2.34 | 1.23 | -1.02 | -0.29 | - | -1.84 | -1.01 | -3.78 | - | -1.71 | -3.83 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
