View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.95 | 0.2 | -1.52 | -2.12 | -1.62 | -3.52 | - | 0.16 | -3.05 | -2.02 | -0.68 | -2.32 | -1.44 | -4.02 | -3.02 | - | - | -0.29 | -2.47 | 1.02 | 0.11 | 0.32 | 1.13 | 0.05 | 0.1 | 1.05 | 1.6 | 0.35 | -0.56 | 0.28 | 0.03 | 0.06 | 0.66 | 0.36 | 0.15 | -1.09 | -0.76 | -0.88 | -0.4 | -1.37 | -0.7 | -1.48 | 2.25 | 1.66 | 3.27 | -0.05 | 0.67 | -1.26 | -0.86 | - | - | -2.81 | -5.13 | -3.79 | - | -3.85 | |
| 3.15 | - | - | - | - | - | - | - | -1.68 | -3.54 | - | - | - | - | - | - | - | - | -2.98 | 0.26 | 0.58 | -1.02 | - | - | 0.41 | 2.9 | -0.01 | - | -1.26 | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.47 | 1.87 | 4.06 | -1.87 | 0.66 | 0.67 | 1.43 | - | - | -0.98 | - | - | -1.92 | -1.25 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
