View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | - | - | -1.4 | -2.76 | -1.72 | - | - | -13.07 | - | -2.02 | -0.75 | -0.71 | 1.42 | -2.19 | - | 5.62 | - | - | - | - | - | - | -1.04 | - | -2.32 | - | - | - | - | - | - | - | - | - | - | - | -1.28 | - | - | - | - | - | - | -1.98 | - | - | - | - | - | -1.97 | - | - | - | - | - | |
| - | -2.02 | -1.22 | -2.38 | -1.25 | -1.68 | - | -1.45 | -2.58 | -0.94 | -0.96 | -0.83 | 0.66 | 1.61 | -1.15 | -1.54 | 5.3 | - | -1.86 | -1.32 | -1.49 | -1.85 | -1.81 | -2.35 | -2.4 | -2.77 | 0.7 | -0.76 | -1.06 | -0.16 | -5.92 | - | - | - | -4.72 | - | - | -4.92 | -3.63 | - | -4.48 | - | -5.99 | -4.61 | - | -3.89 | -1.14 | -6.44 | -5.18 | -4.12 | -2.07 | -2.86 | -4.12 | -3.46 | -2.19 | -4.73 | |
| - | - | - | - | - | - | - | - | -4.33 | 0.17 | - | -0.69 | 0.39 | 1.27 | - | - | 5.57 | - | 0.05 | - | - | - | - | - | - | -4.61 | - | - | - | - | - | - | -0.87 | - | - | - | - | - | - | - | - | -0.95 | - | - | - | - | - | - | -3.61 | - | - | - | -1.01 | - | - | -1.35 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
