View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | - | - | - | - | - | - | - | - | 0.54 | -0.29 | -0.44 | 3.11 | -0.65 | -2.44 | - | - | - | 3.09 | - | - | - | - | - | - | -5.81 | - | - | - | - | 0.33 | -0.22 | 1.69 | -0.89 | 0.5 | 0.52 | -1.16 | -0.42 | 1.68 | 1.33 | -1.01 | -0.2 | 2.29 | 1.97 | 0.74 | -1.06 | - | 1.92 | 1.73 | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | -1.18 | -0.37 | -1.61 | 0.34 | 0.51 | 0.28 | - | - | - | 2.56 | - | - | - | - | - | - | -4.0 | - | - | - | - | 1.01 | 0.67 | 0.5 | 0.59 | 0.76 | -1.67 | 0.32 | 1.49 | 1.81 | 1.65 | 0.01 | -0.92 | 2.74 | 1.84 | 0.43 | - | -0.72 | 2.57 | 2.44 | - | - | -1.84 | - | - | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
