View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.29 | -0.3 | - | -2.63 | - | - | - | -0.67 | -0.15 | -1.4 | - | -3.5 | -0.71 | - | -7.49 | - | - | - | -1.97 | 1.87 | 0.13 | -0.03 | -0.75 | -1.21 | 1.72 | 0.67 | 3.07 | 1.67 | 2.22 | 1.92 | 0.47 | -1.36 | -0.33 | -0.43 | -0.99 | -0.08 | -2.6 | -0.22 | -0.6 | -0.8 | 0.07 | -0.64 | -1.08 | -2.84 | -0.61 | - | 1.06 | -0.85 | -0.97 | -1.12 | 0.53 | 0.77 | -0.34 | -0.27 | 0.2 | -2.48 | |
MA_528074g0010 (EFR) |
-3.32 | -1.85 | -2.21 | -0.6 | -3.87 | -2.12 | -0.24 | 0.57 | -1.13 | -3.22 | - | -4.04 | - | - | -3.44 | -0.37 | - | - | -3.08 | 1.95 | 0.48 | 1.05 | -2.23 | -0.76 | 1.46 | 0.54 | 1.77 | 2.54 | 2.5 | 1.75 | -0.93 | -4.26 | -1.43 | -2.92 | -1.2 | -1.26 | -1.62 | -1.51 | -0.86 | -1.86 | -1.37 | -2.61 | -0.8 | -1.68 | -0.12 | -0.7 | 1.32 | 0.03 | 0.35 | -0.22 | 0.72 | 0.58 | 0.11 | 0.15 | 1.02 | -1.02 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
