View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -2.44 | -2.67 | - | - | - | - | - | -2.96 | -10.35 | -2.8 | - | -5.75 | -4.5 | -4.44 | -5.14 | - | - | - | -1.57 | -0.09 | -1.57 | -0.23 | -1.92 | -0.02 | -0.02 | -1.57 | -2.02 | -0.04 | -0.74 | -0.58 | 1.91 | 2.09 | 2.22 | 2.14 | 1.77 | 0.2 | 1.44 | 2.43 | 1.69 | 1.38 | 2.62 | 0.83 | -6.57 | -7.53 | -5.39 | -1.29 | -0.11 | -3.0 | -2.63 | -1.8 | -1.2 | -0.97 | -2.65 | -2.56 | -0.06 | -5.03 | |
| -1.34 | - | - | - | -3.4 | -0.32 | - | -0.62 | -0.52 | -0.34 | -4.14 | -4.73 | -3.26 | - | -4.86 | - | - | - | -0.1 | -1.52 | 1.25 | -0.3 | 1.27 | -2.39 | -0.71 | -1.18 | -1.64 | -1.03 | -1.11 | -0.68 | 1.59 | 1.45 | 1.64 | 1.78 | 1.59 | -0.44 | 0.46 | 2.26 | 1.65 | 1.25 | 1.95 | 0.35 | 0.54 | 0.29 | -2.39 | -0.1 | 0.93 | -2.41 | -1.61 | -1.8 | -0.87 | -0.01 | -3.17 | -2.29 | -0.03 | -3.63 | |
| -4.28 | -3.39 | - | -7.93 | - | - | - | -1.56 | -1.87 | -3.26 | - | -8.15 | -7.19 | -8.86 | -4.79 | - | - | - | -1.89 | -3.87 | -0.63 | -2.49 | -1.13 | -3.78 | -6.53 | -2.67 | -6.37 | -5.89 | -7.61 | -7.51 | 2.08 | 2.43 | 2.27 | 2.21 | 1.81 | 0.1 | 1.65 | 2.54 | 1.98 | 1.79 | 2.85 | 0.82 | -1.46 | -2.58 | -0.54 | -0.89 | -1.34 | -1.7 | -1.74 | -2.32 | -2.0 | -1.95 | -2.51 | -3.11 | -1.17 | -8.89 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
