View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_10344908g0010 (ACA7) |
0.93 | -0.99 | -1.77 | -3.94 | -1.79 | -0.87 | - | -4.27 | 0.07 | 2.29 | -2.5 | -3.19 | -3.23 | -2.04 | -1.6 | - | - | - | 2.42 | 0.36 | 0.44 | -0.03 | -0.78 | 2.94 | 0.99 | -0.64 | 1.02 | 0.52 | -0.03 | 0.28 | -1.1 | -2.48 | -1.07 | -1.45 | -1.46 | -3.6 | - | -2.05 | -4.63 | -1.46 | -0.88 | -2.66 | - | - | -2.27 | 1.33 | 1.81 | 2.23 | 2.28 | -2.9 | -4.53 | -2.08 | -2.95 | -2.19 | -3.32 | - |
MA_211995g0010 (RLK4) |
- | - | - | - | - | - | - | - | 0.24 | -1.0 | -1.78 | - | - | - | - | - | - | - | -1.56 | 1.19 | 0.31 | -1.75 | - | 2.0 | 2.31 | 0.25 | 2.17 | 2.51 | 2.38 | 2.61 | -1.94 | -0.55 | 0.78 | - | - | - | - | 0.58 | - | -1.82 | -1.13 | -0.48 | - | - | - | - | -0.6 | 1.99 | 1.88 | -0.33 | -1.74 | -1.67 | -0.85 | 0.72 | - | -0.59 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
