View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -1.39 | 1.5 | - | - | - | - | - | - | -0.67 | -2.54 | - | - | - | - | - | - | - | - | -2.49 | 1.08 | -0.29 | - | - | -0.41 | 0.54 | -1.02 | -1.3 | 0.18 | -0.54 | 0.55 | 1.09 | -0.73 | 1.64 | -0.63 | 0.7 | -1.15 | 0.16 | 1.81 | 0.68 | 1.62 | 0.67 | -1.19 | -1.71 | -3.33 | -1.03 | - | -1.21 | 0.33 | 0.39 | -0.65 | 2.06 | 2.87 | -1.53 | -0.2 | 2.4 | -3.79 | |
MA_90407g0010 (AHL22) |
0.19 | 0.34 | - | - | - | - | - | - | -0.32 | -2.08 | - | - | - | - | - | - | - | - | -3.49 | -1.23 | -2.04 | -3.05 | - | -2.16 | 0.38 | -1.71 | - | 0.43 | -1.29 | -2.19 | 1.15 | 0.37 | 1.62 | 0.4 | 1.11 | 0.55 | -0.21 | 1.5 | 0.17 | 1.75 | -0.27 | -1.93 | -2.22 | -0.8 | -3.09 | -2.9 | - | 1.11 | 0.34 | 0.23 | 2.48 | 3.02 | -0.54 | -0.56 | 2.62 | -2.64 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
