View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.66 | 0.23 | - | - | 2.57 | 3.1 | - | - | 0.26 | -0.46 | - | - | - | - | - | - | - | - | 1.47 | - | 0.44 | 0.99 | - | 2.13 | 1.59 | -0.82 | - | 1.32 | 1.78 | - | -0.06 | - | - | - | - | -1.72 | - | 0.49 | - | -0.93 | 0.78 | - | 0.01 | -0.85 | 0.54 | 0.16 | 1.53 | -0.54 | -0.46 | -0.98 | -1.48 | -0.63 | -1.73 | 0.53 | 0.07 | -3.14 | |
| 2.46 | - | - | - | 1.44 | 3.2 | - | - | -1.21 | 0.81 | - | -0.62 | 0.35 | - | -1.17 | - | - | - | 1.46 | - | 0.25 | - | - | - | - | -0.72 | - | - | - | - | -0.01 | - | 0.43 | -0.96 | - | 1.86 | -0.47 | -0.04 | - | - | 0.79 | -0.53 | - | - | - | - | 2.07 | -1.22 | -0.55 | 2.21 | -0.73 | 0.36 | 0.57 | 1.78 | 1.1 | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
