View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.89 | - | 0.01 | 2.33 | 0.54 | - | - | - | 3.12 | -1.89 | - | 0.81 | 0.98 | 0.42 | -0.95 | - | - | - | -2.46 | 0.74 | - | 0.46 | -1.01 | - | - | 0.23 | 0.02 | 1.75 | 0.89 | -0.7 | -1.3 | - | -1.23 | - | - | - | - | -0.05 | 0.46 | -2.64 | - | -3.5 | 1.26 | -1.78 | - | -0.63 | 0.8 | 1.92 | 1.69 | -2.63 | -0.32 | 0.35 | -0.49 | - | 0.19 | 1.05 | |
| - | -3.35 | - | -0.84 | - | - | - | -0.39 | 2.47 | -0.89 | - | -2.95 | -3.56 | -2.72 | - | - | - | - | 0.19 | -1.16 | 2.18 | 0.46 | 0.7 | -2.26 | -1.9 | -0.17 | -2.42 | -4.85 | -2.66 | -4.89 | -0.59 | -2.81 | -1.87 | -1.05 | -2.7 | -2.59 | -2.17 | -0.9 | -1.29 | -1.31 | -1.14 | -2.57 | -3.3 | -3.24 | - | 2.86 | 1.97 | 1.69 | 1.31 | -1.37 | 1.19 | 2.61 | -1.73 | -1.71 | 1.88 | 1.59 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
