View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_10432703g0010 (GLR3.3) |
- | - | - | -1.68 | - | - | - | - | - | -1.46 | - | - | - | - | - | - | - | - | - | - | - | -0.25 | - | - | - | -1.07 | - | -2.81 | - | - | 2.03 | 2.4 | - | 0.82 | 2.27 | 0.04 | - | 1.63 | 0.83 | 1.49 | 1.47 | 0.7 | 0.39 | 0.14 | 0.28 | - | - | - | - | 1.76 | 1.31 | 1.24 | 1.61 | 0.52 | 3.0 | -1.16 |
MA_150705g0010 (PERK10) |
- | - | - | - | - | - | - | - | - | -1.84 | - | - | -0.73 | - | - | - | - | - | - | - | - | - | 1.08 | - | 0.99 | 0.24 | - | - | - | - | 1.69 | 2.08 | -0.27 | 1.19 | 0.63 | - | 0.08 | 0.14 | -1.19 | 1.25 | 3.0 | 1.45 | - | - | - | - | - | -2.76 | -2.48 | 1.69 | 1.01 | 2.43 | 1.5 | 1.44 | 2.46 | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
