View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone |
Immature male cones |
Cambium and expanding xylem |
Cambium |
Expanding xylem |
Expanding and mature xylem |
Maturing xylem |
Wood |
Bark |
Bark, healthy |
S1 xylem tracheids |
S1 whole sections |
S2 ray cells |
S2 xylem tracheids |
S2 whole sections |
Dead late wood |
Phloem and cambium |
Dear early and late wood |
Bark, root and butt rot |
Vegetative shoots - needles |
Vegetative shoots - stem |
Vegetative shoots |
Girdled twig - stem |
Dried twig - needles |
Girdled twig - needles |
Needles |
Needles - dawn |
Needles - later afternoon |
Needles - midday |
Needles - night |
Light, 1 hour |
Light, 3 hours |
Light, 5 hours |
Light, 7 hours |
Light, 9 hours |
Light, 13 hours |
Light, 15 hours |
Darkness, 1 hour |
Darkness, 3 hours |
Darkness, 5 hours |
Darkness, 7 hours |
Darkness, 11 hours |
Vegetative buds |
Female buds |
Male buds |
Buds |
Pineapple galls |
Somatic germinants - abnormal type |
Somatic germinants - normal type |
Cell culture - H20 - 5 days |
Cell culture - KI added - 5 days |
Cell culture - KI added - 20 days |
Cell culture - KI removed - 4 days |
Cell culture - KI removed - 12 days |
Cell culture - solid medium |
Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_10427998g0010 (YUC7) |
0.59 | -0.77 | - | - | - | - | - | -6.16 | 2.12 | 0.44 | - | - | - | - | - | - | - | - | 0.91 | -1.42 | -0.57 | -1.51 | -0.51 | -4.27 | -3.32 | -1.21 | - | -4.27 | -5.4 | - | 1.04 | -0.33 | -0.11 | 0.62 | 0.62 | 1.18 | 0.06 | 0.89 | 0.62 | 0.52 | 1.18 | -0.26 | 0.8 | 0.13 | -1.83 | 0.82 | 0.91 | 0.36 | -0.52 | 1.57 | 0.53 | 0.85 | 1.12 | 1.04 | 2.48 | -0.42 |
MA_10427998g0020 (YUC8) |
-0.42 | 0.2 | - | - | - | - | - | - | 2.51 | -0.68 | - | - | - | - | - | - | - | - | -1.51 | - | -1.69 | -3.23 | -1.69 | -4.62 | -2.35 | -1.97 | - | -3.03 | -4.75 | -4.65 | 1.99 | 0.49 | 0.77 | 1.27 | 0.6 | 1.76 | 0.86 | 1.52 | 1.5 | 0.88 | 1.69 | -0.04 | 0.8 | 0.33 | -2.66 | 0.7 | -1.41 | 0.58 | 0.07 | 0.48 | -0.81 | -0.01 | 0.94 | 0.83 | 1.56 | -0.36 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.
