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  5. Cba_g50660

Cba_g50660 (AMS)


Aliases : AMS

Description : bHLH-type transcription factor & original description: none


Gene families : OG0000267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g50660

Target Alias Description ECC score Gene Family Method Actions
Adi_g018971 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09209 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13124 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23813 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g25448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26760 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62130 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g08956 SCRM2, ICE2 transcriptional regulator *(DYT1/AMS) & original... 0.05 OrthoFinder output from all 47 species
Aop_g05844 ATBHLH029,... bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11432 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44253.t1 Aspi01Gene44253 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0005.g009209 ATBHLH029,... bHLH-type transcription factor & original description: CDS=1-1536 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009834 No alias bHLH-type transcription factor & original description:... 0.07 OrthoFinder output from all 47 species
Cba_g15970 No alias bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.01G042200.1 Ceric.01G042200 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.01G091400.1 ATICE1, ICE1,... bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.01G091600.1 Ceric.01G091600 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.01G112100.1 Ceric.01G112100 bHLH-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.20G044600.1 Ceric.20G044600 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.20G044800.1 Ceric.20G044800 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.20G045000.1 Ceric.20G045000 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G045100.1 Ceric.20G045100 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.29G058800.1 Ceric.29G058800 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g14460 No alias bHLH-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g21599 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22613 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07016 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g13552 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031466001 ATBHLH029,... Nutrient uptake.iron uptake.reduction-based strategy... 0.02 OrthoFinder output from all 47 species
Gb_15579 SCRM2, ICE2 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Gb_36380 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Len_g54056 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24609 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431811g0010 AMS transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_10433418g0010 SCRM2, ICE2 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_2643g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_439607g0010 SCRM2, ICE2 transcription factor (bHLH) 0.08 OrthoFinder output from all 47 species
Mp2g07150.1 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Msp_g06243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07921 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08918 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g19168 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g29253 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g30612 ATBHLH029,... bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g02789 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07432 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18806 No alias bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g14150 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06362 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01995 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43711 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45924 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015846 No alias bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022593 No alias bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g34229 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g42987 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Smo431375 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc06g051550.4.1 ATBHLH029,... transcription factor (bHLH). iron uptake transcription factor FIT 0.03 OrthoFinder output from all 47 species
Spa_g02622 No alias bHLH-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g08873 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19879 No alias bHLH-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g27625 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29282 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29801 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30853 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g32940 AMS bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45568 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52634 SCRM2, ICE2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09430 No alias bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g09494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28838 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008393_P001 ATBHLH029,... transcription factor (bHLH). iron uptake transcription factor FIT 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003855 3-dehydroquinate dehydratase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0007265 Ras protein signal transduction IEP HCCA
BP GO:0007266 Rho protein signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 238 280
No external refs found!