Cba_g53908


Description : not classified & original description: none


Gene families : OG0002877 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002877_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g53908

Target Alias Description ECC score Gene Family Method Actions
Adi_g052682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g129489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g25342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67545 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g72549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41326 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g41658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g50614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16931 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 1 36
IPR002885 Pentatricopeptide_repeat 66 88
No external refs found!