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  5. Cba_g54168

Cba_g54168


Description : transcriptional co-regulator *(OFP) & original description: none


Gene families : OG0000209 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g54168
Cluster HCCA: Cluster_474

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00189070 OFP12, ATOFP12,... RNA biosynthesis.transcriptional activation.OFP... 0.02 OrthoFinder output from all 47 species
Ala_g25921 No alias transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22487 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42861.t2 ATOFP6, OFP6,... transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G010500.1 Ceric.18G010500 transcriptional co-regulator *(OFP) & original... 0.02 OrthoFinder output from all 47 species
Ceric.29G044100.1 ATOFP5, OFP5,... transcriptional co-regulator *(OFP) & original... 0.02 OrthoFinder output from all 47 species
Dac_g12381 No alias transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06311 OFP8, ATOFP8 transcriptional co-regulator *(OFP) & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g31353 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08652 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g01335 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g23138 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g45383 No alias transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07338 No alias transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019703 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original... 0.02 OrthoFinder output from all 47 species
Solyc02g085500.4.1 Solyc02g085500 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g32323 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e007176_P001 ATOFP3, OFP3,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0016020 membrane IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR006458 Ovate_C 197 252
No external refs found!