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  5. Cba_g55017

Cba_g55017


Description : CAPE precursor polypeptide & original description: none


Gene families : OG0000174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000174_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g55017
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Cba_g40108 PR-1-LIKE CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g53960 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50580 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51023 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14751 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g43596 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g44565 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56603 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR014044 CAP_domain 227 343
No external refs found!