Description : component *(RPP1) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0000349 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000349_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g55559 | |
| Cluster | HCCA: Cluster_223 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G01100 | No alias | 60S acidic ribosomal protein family | 0.02 | OrthoFinder output from all 47 species | |
| AT5G47700 | No alias | 60S acidic ribosomal protein family | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g46228 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0068.g036426 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cre17.g738300 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01027436001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01038637001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g01989 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10430200g0010 | No alias | component RPP1 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Mp6g11950.1 | No alias | component RPP1 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g29772 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g19945 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c1_36220V3.1 | Pp3c1_36220 | 60S acidic ribosomal protein family | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c20_2800V3.1 | Pp3c20_2800 | 60S acidic ribosomal protein family | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c23_18100V3.1 | Pp3c23_18100 | 60S acidic ribosomal protein family | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g10738 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29072 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Smo133023 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g016470.3.1 | Solyc01g016470 | component RPP1 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g03569 | No alias | component *(RPP1) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | HCCA |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | HCCA |
| BP | GO:0006414 | translational elongation | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | HCCA |
| BP | GO:0015977 | carbon fixation | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
