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  5. Cba_g55857

Cba_g55857


Description : not classified & original description: none


Gene families : OG0000049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g55857

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00229270 evm_27.TU.AmTr_v1... GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g056305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G052800.1 FXG1, ATFXG1,... not classified & original description: pacid=50608510... 0.02 OrthoFinder output from all 47 species
Ceric.31G058600.1 Ceric.31G058600 not classified & original description: pacid=50574427... 0.02 OrthoFinder output from all 47 species
Dac_g01459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03504 FXG1, ATFXG1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g22660.1 LOC_Os01g22660 GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g06720.2 LOC_Os05g06720 GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g03217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g11303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14937 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g39222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g46736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g66059 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g03963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g073100.4.1 Solyc06g073100 GDSL esterase/lipase At3g27950 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e014296_P001 Zm00001e014296 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
CC GO:0009317 acetyl-CoA carboxylase complex IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0042162 telomeric DNA binding IEP HCCA
MF GO:0043047 single-stranded telomeric DNA binding IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP HCCA
BP GO:0050684 regulation of mRNA processing IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0098847 sequence-specific single stranded DNA binding IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001087 GDSL 31 358
No external refs found!