Cba_g58722 (scpl44)

Aliases : scpl44

Description : EC_3.4 hydrolase acting on peptide bond (peptidase) & original description: none

Gene families : OG0000072 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000072_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g58722
Cluster	HCCA: Cluster_139

Target	Alias	Description	ECC score	Gene Family Method
AT5G23210	SCPL34	serine carboxypeptidase-like 34	0.03	OrthoFinder output from all 47 species
MA_10427716g0020	scpl31	serine carboxypeptidase	0.04	OrthoFinder output from all 47 species
MA_33420g0010	SCPL24, BRS1	serine carboxypeptidase	0.03	OrthoFinder output from all 47 species
MA_769g0010	scpl31	serine carboxypeptidase	0.04	OrthoFinder output from all 47 species
Solyc01g087970.3.1	scpl40, Solyc01g087970	serine carboxypeptidase	0.03	OrthoFinder output from all 47 species
Solyc02g078690.2.1	scpl31, Solyc02g078690	serine carboxypeptidase	0.03	OrthoFinder output from all 47 species
Zm00001e010893_P002	scpl40, Zm00001e010893	serine carboxypeptidase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004180	carboxypeptidase activity	None	Extended
MF	GO:0004185	serine-type carboxypeptidase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	None	Extended
MF	GO:0008238	exopeptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0070008	serine-type exopeptidase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003729	mRNA binding	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
CC	GO:0005685	U1 snRNP	IEP	HCCA
BP	GO:0006376	mRNA splice site selection	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	HCCA
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0051259	protein complex oligomerization	IEP	HCCA
BP	GO:0051260	protein homooligomerization	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
CC	GO:0097525	spliceosomal snRNP complex	IEP	HCCA
CC	GO:0120114	Sm-like protein family complex	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001563	Peptidase_S10	31	456

External Links

No external refs found!