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  5. Cba_g60916

Cba_g60916


Description : not classified & original description: none


Gene families : OG0000123 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000123_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g60916

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00071750 evm_27.TU.AmTr_v1... Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Als_g12809 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Als_g33446 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
Aspi01Gene38528.t1 Aspi01Gene38528 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Ceric.26G042800.1 Ceric.26G042800 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Ceric.26G042900.1 Ceric.26G042900 not classified & original description: pacid=50600086... 0.02 OrthoFinder output from all 47 species
Ceric.26G043100.1 Ceric.26G043100 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Ceric.26G043700.1 F3H, F3'H, TT6,... not classified & original description: pacid=50600222... 0.02 OrthoFinder output from all 47 species
Dcu_g31490 DMR6 EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Ehy_g18205 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.04 OrthoFinder output from all 47 species
Ehy_g24328 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
GSVIVT01002342001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.04 OrthoFinder output from all 47 species
GSVIVT01009099001 No alias Protein DOWNY MILDEW RESISTANCE 6 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01013252001 No alias S-norcoclaurine synthase 1 OS=Coptis japonica 0.03 OrthoFinder output from all 47 species
GSVIVT01019696001 No alias Phytohormones.salicylic acid.conjugation and... 0.03 OrthoFinder output from all 47 species
GSVIVT01027361001 DMR6 Secondary metabolism.phenolics.flavonoid synthesis and... 0.04 OrthoFinder output from all 47 species
Gb_19151 No alias no description available(sp|g9m9m1|f6h12_ipoba : 264.0)... 0.03 OrthoFinder output from all 47 species
Gb_22186 No alias Flavanone 3-dioxygenase 2 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os03g03034.1 DMR6, LOC_Os03g03034 type-I flavone synthase 0.03 OrthoFinder output from all 47 species
LOC_Os04g49194.1 DMR6, LOC_Os04g49194 type-I flavone synthase 0.03 OrthoFinder output from all 47 species
LOC_Os10g39140.1 DMR6, LOC_Os10g39140 type-I flavone synthase 0.03 OrthoFinder output from all 47 species
Lfl_g40945 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
MA_130809g0010 No alias Flavanone 3-dioxygenase 2 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
MA_183108g0010 No alias Protein DMR6-LIKE OXYGENASE 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_186973g0010 No alias Protein DMR6-LIKE OXYGENASE 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_72340g0010 No alias Protein DMR6-LIKE OXYGENASE 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_8445113g0010 No alias Protein DMR6-LIKE OXYGENASE 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_9118954g0010 No alias Protein DMR6-LIKE OXYGENASE 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pnu_g18411 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Smo167760 No alias Protein DMR6-LIKE OXYGENASE 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc02g070080.4.1 Solyc02g070080 Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger... 0.02 OrthoFinder output from all 47 species
Solyc03g080190.3.1 DMR6, Solyc03g080190 type-I flavone synthase 0.02 OrthoFinder output from all 47 species
Solyc06g083910.3.1 Solyc06g083910 Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger... 0.02 OrthoFinder output from all 47 species
Solyc11g007890.2.1 Solyc11g007890 gibberellin-A12 hydration enzyme (GAS2) 0.04 OrthoFinder output from all 47 species
Zm00001e033884_P001 Zm00001e033884 mugineic acid 3-dioxygenase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR026992 DIOX_N 79 147
No external refs found!