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  5. Cba_g61924

Cba_g61924


Description : protease *(SBT4) & original description: none


Gene families : OG0000027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g61924
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00107870 SLP2,... Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
AMTR_s00069p00164320 evm_27.TU.AmTr_v1... Subtilisin-like protease SBT4.14 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G14067 No alias Subtilase family protein 0.03 OrthoFinder output from all 47 species
AT5G59130 No alias Subtilase family protein 0.04 OrthoFinder output from all 47 species
Aev_g39913 No alias protease *(SBT2) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20341 ARA12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007672 No alias not classified & original description: CDS=1-2610 0.02 OrthoFinder output from all 47 species
Cba_g13195 No alias protease *(SBT1) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39681 No alias protease *(SBT2) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009472001 No alias Subtilisin-like protease SBT1.9 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01009968001 ATSBT5.2 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
GSVIVT01027585001 ATSBT1.1, SBTI1.1 Subtilisin-like protease SBT1.1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_30236 ARA12 protease (SBT1) 0.02 OrthoFinder output from all 47 species
Gb_37571 XSP1 Cucumisin OS=Cucumis melo (sp|q39547|cucm1_cucme : 508.0) 0.02 OrthoFinder output from all 47 species
LOC_Os04g03810.1 LOC_Os04g03810 Subtilisin-like protease SBT3.3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g41492 ARA12 protease *(SBT1) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43560 ARA12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43713 ARA12 protease *(SBT1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43956 AIR3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_20710V3.1 SLP3, Pp3c17_20710 subtilisin-like serine protease 3 0.01 OrthoFinder output from all 47 species
Ppi_g08727 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g006660.3.1 ATSBT5.2, Solyc01g006660 protease (SBT5) 0.05 OrthoFinder output from all 47 species
Solyc01g087740.1.1 Solyc01g087740 protease (SBT1) 0.02 OrthoFinder output from all 47 species
Solyc02g072330.3.1 ARA12, Solyc02g072330 Subtilisin-like protease SBT1.2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g081250.3.1 Solyc03g081250 Subtilisin-like protease SBT3.6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Tin_g21522 No alias protease *(SBT1) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001009_P003 SLP2, Zm00001e001009 protease (SBT1) 0.02 OrthoFinder output from all 47 species
Zm00001e034476_P001 ATSBT5.4,... protease (SBT5) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008236 serine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR041469 Subtilisin-like_FN3 555 654
IPR000209 Peptidase_S8/S53_dom 38 498
No external refs found!