1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g62425

Cba_g62425 (OPCL1)


Aliases : OPCL1

Description : not classified & original description: none


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g62425
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00239750 OPCL1,... Phytohormones.jasmonic acid.synthesis.OPC-8:CoA synthetase 0.04 OrthoFinder output from all 47 species
AMTR_s00076p00191640 evm_27.TU.AmTr_v1... 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G20510 OPCL1 OPC-8:0 CoA ligase1 0.03 OrthoFinder output from all 47 species
Aob_g13029 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g27234 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63195.t1 OPCL1, Aspi01Gene63195 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01001827001 No alias 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os01g67540.1 LOC_Os01g67540 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Mp1g05060.1 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pp3c3_24370V3.1 Pp3c3_24370 AMP-dependent synthetase and ligase family protein 0.01 OrthoFinder output from all 47 species
Ppi_g29856 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo429785 No alias 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Solyc12g094520.2.1 OPCL1, Solyc12g094520 OPC-8:CoA synthetase 0.04 OrthoFinder output from all 47 species
Spa_g02284 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 132 163
IPR000873 AMP-dep_Synth/Lig_com 2 123
No external refs found!