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  5. Cba_g64942

Cba_g64942 (PUB12, AtPUB12)


Aliases : PUB12, AtPUB12

Description : not classified & original description: none


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g64942

Target Alias Description ECC score Gene Family Method Actions
Adi_g009233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g023452 ATPUB17, PUB17 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g059681 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10525.t1 ATPUB17, PUB17,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36179.t1 Aspi01Gene36179 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36180.t1 Aspi01Gene36180 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0030.g024386 No alias not classified & original description: CDS=1-501 0.04 OrthoFinder output from all 47 species
Cba_g00725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g02580 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04894 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g08149 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
MA_10431467g0020 ATPUB17, PUB17 U-box domain-containing protein 1 OS=Medicago truncatula... 0.01 OrthoFinder output from all 47 species
Ore_g04960 PUB14, ATPUB14 E3 ubiquitin ligase *(PUB8) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020568 PUB13, ATPUB13 E3 ubiquitin ligase & original description: CDS=347-2224 0.01 OrthoFinder output from all 47 species
Spa_g12131 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000225 Armadillo 39 77
IPR000225 Armadillo 81 118
No external refs found!