1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g67240

Cba_g67240


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g67240

Target Alias Description ECC score Gene Family Method Actions
Aev_g06254 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42281 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48329 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08381 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25991.t2 Aspi01Gene25991 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13422 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20714 LOI1, MEF11 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07068 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07097 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36261 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37426 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_597g0020 DOT4 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04708 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12351 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo98472 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Solyc09g090440.1.1 LPA66, Solyc09g090440 Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
Spa_g07598 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 268 314
IPR002885 Pentatricopeptide_repeat 471 516
IPR002885 Pentatricopeptide_repeat 670 718
IPR002885 Pentatricopeptide_repeat 167 214
IPR046848 E_motif 789 851
IPR002885 Pentatricopeptide_repeat 545 566
IPR002885 Pentatricopeptide_repeat 444 465
IPR002885 Pentatricopeptide_repeat 573 603
IPR002885 Pentatricopeptide_repeat 40 60
IPR002885 Pentatricopeptide_repeat 371 400
IPR002885 Pentatricopeptide_repeat 645 666
IPR002885 Pentatricopeptide_repeat 344 368
IPR002885 Pentatricopeptide_repeat 68 98
IPR002885 Pentatricopeptide_repeat 142 166
IPR002885 Pentatricopeptide_repeat 746 770
No external refs found!