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  5. Cba_g67690

Cba_g67690


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g67690
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00252800 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.02 OrthoFinder output from all 47 species
Ala_g23769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28308 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05139 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10753 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26629 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30855 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000999 No alias not classified & original description: CDS=128-2962 0.02 OrthoFinder output from all 47 species
Cba_g20154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18832 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g36036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16528 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03570 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009574001 OSB1 Cell cycle.organelle machineries.DNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01010898001 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.02 OrthoFinder output from all 47 species
LOC_Os01g19380.1 LOC_Os01g19380 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os01g46230.1 MEF1, LOC_Os01g46230 RNA editing factor (MEF1) 0.02 OrthoFinder output from all 47 species
LOC_Os10g34720.1 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os10g40920.1 LOC_Os10g40920 RNA editing factor (MEF13) 0.02 OrthoFinder output from all 47 species
LOC_Os12g36620.1 LOC_Os12g36620 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Len_g03869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g28680 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g32845 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g41161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06726 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17485 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25612 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g32916 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_474261g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
MA_7907g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Msp_g03944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g07558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07674 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09710 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g41721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05130 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13275 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63495 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05329 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30547 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo130420 No alias Pentatricopeptide repeat-containing protein At4g19191,... 0.02 OrthoFinder output from all 47 species
Solyc01g098150.3.1 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.02 OrthoFinder output from all 47 species
Solyc07g008480.3.1 Solyc07g008480 Pentatricopeptide repeat-containing protein At3g14730... 0.02 OrthoFinder output from all 47 species
Spa_g04185 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g19341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001007_P001 Zm00001e001007 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e001038_P001 CRR2, Zm00001e001038 Pentatricopeptide repeat-containing protein At1g08070,... 0.02 OrthoFinder output from all 47 species
Zm00001e031660_P001 Zm00001e031660 Pentatricopeptide repeat-containing protein At4g14170... 0.02 OrthoFinder output from all 47 species
Zm00001e040920_P001 Zm00001e040920 Pentatricopeptide repeat-containing protein At3g26540... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 150 199
No external refs found!